This volume details techniques on the study of Isolation, characterization, and exploration of actinobacteria in industrial, food, agricultural, and environmental microbiology. Chapters cover a wide range of basic and advanced techniques associated with research on isolation, characterization and identification of actinobacteria in soil, sediment, estuarine, water, Saltpan, Mangroves, plants, lichens, sea weeds, sea grass, animals-crab, snail, shrimp.

Authoritative and cutting-edge, Methods in Actinobacteriology aims to be a useful practical guide to researches to help further their study in this field.

Includes cutting-edge methods and protocols Provides step-by-step detail essential for reproducible result Contains key notes and implementation advice from the experts

Klappentext

Isolation of Actinobacteria from Soil and Marine Sediment Samples.- Isolation of Actinobacteria from Water Sources.- Isolation of Actinobacteria from Deep Sea.- Isolation of Actinobacteria from Estuary.- Isolation of Actinobacteria from Sponges.- Isolation of Actinobacteria from Shrimp.- Isolation of Actinobacteria from Coral Reef.- Isolation of Actinobacteria from Earthworm Cast.- Isolation of Actinobacteria from Compost Samples.- Isolation of Gut Actinobacteria from Fecal and Tissue Samples.- Isolation of Gut Actinobacteria from Termites.- Isolation of Gut Actinobacteria from Fishes.- Isolation of Actinobacteria from Mangrove Plants.- Isolation of Actinobacteria from Seaweeds.- Isolation of Actinobacteria from Hills.- Isolation of Endophytic Actinobacteria from Flowers, Fruits, and Seeds of Higher Plants.- Isolation of Actinobacteria from Desert Soils.- Isolation of Epiphytic Actinobacteria from Rhizosphere of Spermatophytes.- Isolation of Epiphytic Actinobacteria from Lichens.- Isolation of Endophytic Actinobacteria from Lichens.- Isolation of Psychrophilic and Psychrotolerant Actinobacteria.- Isolation of Halophilic Actinobacteria from different habitats.- Isolation of Thermophilic Actinobacteria from Different Habitats.- Isolation of Stone Dwelling Actinobacteria.- Cultivation Techniques of Rare Actinobacteria.- Chemo-taxonomical Characterization of Actinobacteria.- Application of Bioinformatic Tools for Phylogenetic Analysis.- Methods for Whole-genome Analysis of Actinobacteria through Bioinformatics Approaches.- Nanopore Based Long Read Sequencing Technology to Obtain Highly Contiguous Whole Genome Sequence of Actinobacterial Genomes like Streptomyces sp..- Mining genomes of Actinobacteria.- Comparative genomics of Actinobacteria.- Biosynthetic Gene Cluster Analysis in Micromonospora Species Using Antismash: Secondary Metabolite Genome Mining Pipeline.- Biosynthetic Gene Cluster Analysis in Actinobacterial Genera Streptomyces spp..- PCR based Determination of Secondary Metabolite Genes in Actinobacterial Cultures. Molecular Mass Determination of Bacteriocin by SDS-PAGE analysis.- MALDI-TOF Analysis of Actinobacterial Peptides with Respect to MASCOT Database.- Protocols for Preclinical Evaluation and Molecular Docking of Antimicrobial Compounds from Streptomyces sp.- Drug Likeliness Evaluation, ADME-Toxicity Investigation, Docking modes between the Ligand and the target Enzyme and Active Site Prediction.- Energy-based Pharmacophore Hypothesis Combined with Molecular Simulation Protocol for The Screening Of Bioactive Compounds From the Class of Actinobacteria.- Receptor cavity-based approach combined with Autodock protocol for the screening of antiviral compounds from Streptomyces sp..- Pharmacophore Based Hypothesis Combined with Molecular Docking Protocol for the Screening Of Anti-Cancer Compounds from Streptomyces sp..- Methods of Identification and Validation of Drug Target.- Transcriptome profiles of Streptomyces sp..- Culture of Actinobacteria, Isolation, and Characterization of their Bioactive Compounds.- Miniaturized Production of Bioactive Extracts from Actinobacteria.- Screening, Characterization, and Identification of Antibacterial Compounds From Actinobacteria.- Isolation, Identification, and Screening of Polyene Antifungal Compound Producing Streptomyces sampsonii MDCE7 from agroforestry soil.- Screening of Actinobacterial Cultures for Antimycobacterial Activity using Mycobacterium smegmatis.- Screening of Actinobacterial Extracts/Compounds for Antim

Zusammenfassung
Chapters cover a wide range of basic and advanced techniques associated with research on isolation, characterization and identification of actinobacteria in soil, sediment, estuarine, water, Saltpan, Mangroves, plants, lichens, sea weeds, sea grass, animals-crab, snail, shrimp.

Inhalt
Isolation of Actinobacteria from Soil and Marine Sediment Samples.- Isolation of Actinobacteria from Water Sources.- Isolation of Actinobacteria from Deep Sea.- Isolation of Actinobacteria from Estuary.- Isolation of Actinobacteria from Sponges.- Isolation of Actinobacteria from Shrimp.- Isolation of Actinobacteria from Coral Reef.- Isolation of Actinobacteria from Earthworm Cast.- Isolation of Actinobacteria from Compost Samples.- Isolation of Gut Actinobacteria from Fecal and Tissue Samples.- Isolation of Gut Actinobacteria from Termites.- Isolation of Gut Actinobacteria from Fishes.- Isolation of Actinobacteria from Mangrove Plants.- Isolation of Actinobacteria from Seaweeds.- Isolation of Actinobacteria from Hills.- Isolation of Endophytic Actinobacteria from Flowers, Fruits, and Seeds of Higher Plants.- Isolation of Actinobacteria from Desert Soils.- Isolation of Epiphytic Actinobacteria from Rhizosphere of Spermatophytes.- Isolation of Epiphytic Actinobacteria from Lichens.- Isolation of Endophytic Actinobacteria from Lichens.- Isolation of Psychrophilic and Psychrotolerant Actinobacteria.- Isolation of Halophilic Actinobacteria from different habitats.- Isolation of Thermophilic Actinobacteria from Different Habitats.- Isolation of Stone Dwelling Actinobacteria.- Cultivation Techniques of Rare Actinobacteria.- Chemo-taxonomical Characterization of Actinobacteria.- Application of Bioinformatic Tools for Phylogenetic Analysis.- Methods for Whole-genome Analysis of Actinobacteria through Bioinformatics Approaches.- Nanopore Based Long Read Sequencing Technology to Obtain Highly Contiguous Whole Genome Sequence of Actinobacterial Genomes like Streptomyces sp..- Mining genomes of Actinobacteria.- Comparative genomics of Actinobacteria.- Biosynthetic Gene Cluster Analysis in Micromonospora Species Using Antismash: Secondary Metabolite Genome Mining Pipeline.- Biosynthetic Gene Cluster Analysis in Actinobacterial Genera Streptomyces spp..- PCR based Determination of Secondary Metabolite Genes in Actinobacterial Cultures. Molecular Mass Determination of Bacteriocin by SDS-PAGE analysis.- MALDI-TOF Analysis of Actinobacterial Peptides with Respect to MASCOT Database.- Protocols for Preclinical Evaluation and Molecular Docking of Antimicrobial Compounds from Streptomyces sp.- Drug Likeliness Evaluation, ADME-Toxicity Investigation, Docking modes between the Ligand and the target Enzyme and Active Site Prediction.- Energy-based Pharmacophore Hypothesis Combined with Molecular Simulation Protocol for The Screening Of Bioactive Compounds From the Class of Actinobacteria.- Receptor cavity-based approach combined with Autodock protocol for the screening of antiviral compounds from Streptomyces sp..- Pharmacophore Based Hypothesis Combined with Molecular Docking Protocol for the Screening Of Anti-Cancer Compounds from Streptomyces sp..- Methods of Identification and Validation of Drug Target.- Transcriptome profiles of Streptomyces sp..- Culture of Actinobacteria, Isolation, and Characterization of their Bioactive Compounds.- Miniaturized Production of Bioactive Extracts from Actinobacteria.- Screening, Characterization, and Identification of Antibacterial Compounds From Actinobacteria.- Isolation, Identification, and Screening of Polyene Antifungal…