Applied Parallel Computing. New Paradigms for HPC in Industry and Academia

The papers in this volume were presented at PARA 2000, the Fifth International Workshop on Applied Parallel Computing. PARA 2000 was held in Bergen, Norway, June 18-21, 2000. The workshop was organized by Parallab and the Department of Informatics at the University of Bergen. The general theme for PARA 2000 was New paradigms for HPC in industry and academia focusing on: { High-performance computing applications in academia and industry, { The use of Java in high-performance computing, { Grid and Meta computing, { Directions in high-performance computing and networking, { Education in Computational Science. The workshop included 9 invited presentations and 39 contributed pres- tations. The PARA 2000 meeting began with a one-day tutorial on OpenMP programming led by Timothy Mattson. This was followed by a three-day wor- hop. The rst three PARA workshops were held at the Technical University of Denmark (DTU), Lyngby (1994, 1995, and 1996). Following PARA'96, an - ternational steering committee for the PARA meetings was appointed and the committee decided that a workshop should take place every second year in one of the Nordic countries. The 1998 workshop was held at Ume a University, Sweden. One important aim of these workshops is to strengthen the ties between HPC centers, academia, and industry in the Nordic countries as well as worldwide. The University of Bergen organized the 2000 workshop and the next workshop in the year 2002 will take place at the Helsinki University of Technology, Espoo, Finland.

Includes supplementary material: sn.pub/extras

Inhalt
Speaker Information.- Industrial Applications: Challenges in Modeling and Computing.- Data Grids for Next Generation Problems in Science and Engineering.- High-Performance Computers: Yesterday, Today, and Tomorrow.- The Evolution of OpenMP.- JavaGrande High Performance Computing with Java.- Ocean and Climate Prediction on Parallel Super Computers.- LAWRA Linear Algebra with Recursive Algorithms.- Solving CFD Problems with Open Source Parallel Libraries.- High-Performance Library Software for QR Factorization.- Parallel Triangular Sylvester-Type Matrix Equation Solvers for SMP Systems Using Recursive Blocking.- On the Efficiency of Scheduling Algorithms for Parallel Gaussian Elimination with Communication Delays.- High Performance Cholesky Factorization via Blocking and Recursion That Uses Minimal Storage.- Parallel Two-Stage Reduction of a Regular Matrix Pair to Hessenberg-Triangular Form.- A Fast Minimal Storage Symmetric Indefinite Solver.- A Scalable Parallel Assembly for Irregular Meshes Based on a Block Distribution for a Parallel Block Direct Solver.- MUMPS: A General Purpose Distributed Memory Sparse Solver.- Runtime Adaptation of an Iterative Linear System Solution to Distributed Environments.- A Local Refinement Algorithm for Data Partitioning.- Feedback Guided Scheduling of Nested Loops.- A Comparison of Partitioning Schemes for Blockwise Parallel SAMR Algorithms.- Parallelizing an Adaptive Dynamical Grid Generator in a Climatological Trace Gas Transport Application.- Optimal Parameter Values for a Parallel Structured Adaptive Mesh Refinement Algorithm.- Partition of Unstructured Finite Element Meshes by a Multilevel Approach.- GRISK: An Internet Based Search for K-Optimal Lattice Rules.- Parallel and Distributed Document Overlap Detection on the Web.- AParallel Implementation of a Job Shop Scheduling Heuristic.- Restructuring Irregular Computations for Distributed Systems Using Mobile Agents.- An Information System for Long-Distance Cooperation in Medicine.- Hydra - Decentralized and Adaptative Approach to Distributed Computing.- Object-Oriented Approach to Finite Element Modeling on Clusters.- An Object Oriented Framework for Parallel Multiple Optimizations.- Experiments in Separating Computational Algorithm from Program Distribution and Communication.- Performance Tuning on Parallel Systems: All Problems Solved?.- Performance Measurement Support for MPI Applications with PATOP.- A Parallel Volume Visualization Using Extended Space Leaping Method.- Hands-On Training for Undergraduates in High-Performance Computing Using Java.- A Parallel 3-D FFT Algorithm on Clusters of Vector SMPs.- High-End Computing on SHV Workstations Connected with High Performance Network.- From the Big Bang to Massive Data Flow: Parallel Computing in High Energy Physics Experiments.- A Data Parallel Formulation of the Barnes-Hut Method for N-Body Simulations.- Par-T: A Parallel Relativistic Fully 3D Electromagnetic Particle-in-Cell Code.- Evaluation of MPI's One-Sided Communication Mechanism for Short-Range Molecular Dynamics on the Origin2000.- Ship Hull Hydrodynamic Analysis Using Distributed Shared Memory.- Domain Decomposition Solvers for Large Scale Industrial Finite Element Problems.- A High Parallel Procedure to Initialize the Output Weights of a Radial Basis Function or BP Neural Network.- High-Performance Computing in Geomechanics by a Parallel Finite Element Approach.