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TheseproceedingscontainthepaperspresentedatPARA2002,theSixth- ternationalConferenceonAppliedParallelComputing. PARA2002washeldin Espoo,Finland,June15 18,2002,andhostedbyCSC,theFinnishinformation technologycenterforscience. Thegeneralthemeoftheconferencewasadvanced scienti?ccomputing. Theconferencedemonstratedtheabilityofadvancedscienti?ccomputingto solvereal-worldproblems,andhighlightedmethods,instruments,andtrendsin futurescienti?ccomputing. Theconferencebeganwithaone-daytutorialsession onGridprogramming. Theconferencefocusedonanapplication-oriented,multi-disciplinary,and multi-scaleapproach. Awidevarietyofscienti?ccomputingapplicationswere introduced,fromsemiconductorprocessingandbehaviorofthehumanbodyto oceanicandatmosphericphenomena. Scienti?ccomputingcoupledwithmulti-disciplinaryandmulti-scaleexp- tisewillplayasigni?cantroleinsolvingchallengingproblemsinscience. The conferenceaimstodemonstratehowdi?cultproblemscanbesolvedusing- thematicalmodeling,e?cientnumericalmethods,advancedprogramdevel- ment,andtoolsinparallelcomputing. Theconferencealsofocusedondataanalysis. Theamountofinformation availableisrapidlyincreasing. Dataminingcanbeusedtosearchforregularities inhugedatasets,andnewtechniquesinvisualization,e. g. ,virtualenvironments, canbeusedintheinterpretationofnumericalinformation. Totheaudience,theconferencealsoreportedonrecentandfuturetrendsin generictechnologiesinscienti?ccomputing. Thesecoveredvariousenvironments, e. g. ,clusters,supercomputers,andGridtechnologies. April2002 JuhaFagerholm,JuhaHaataja,JariJ arvinen, MikkoLyly,PeterR?aback,andVilleSavolainen VII Organization PARA2002wasorganizedbyCSC,theFinnishITcenterforscience. CSCisa centerforhigh-performancecomputingandnetworking,ownedbytheFinnish MinistryofEducation. CSCprovidesmodeling,computing,andinformation servicesforuniversities,researchinstitutions,andindustrialcompanies. SteeringCommittee PetterBjørstad UniversityofBergen(Norway) JackDongarra UniversityofTennesseeand OakRidgeNationalLaboratory(USA) Bj ornEngquist PDC,RoyalInstituteofTechnology(Sweden) KristjanJonasson UniversityofIceland(Iceland) BoK?agstr om Ume?aUniversityandHPC2N(Sweden) RistoNieminen HelsinkiUniversityofTechnology(Finland) KarsteinS orli SINTEF,DeptofIndustrial Mathematics(Norway) KariLaasonen UniversityofOulu(Finland) JerzyWa sniewski DanishComputingCentreforResearchand Education(UNI C)(Denmark) LocalOrganizingCommittee JariJ arvinen CSC,chairman LauriKettunen TampereUniversityofTechnology KariLaasonen UniversityofOulu RistoNieminen HelsinkiUniversityofTechnology TapaniPakkanen UniversityofJoensuu JussiRahola NokiaResearchCenter HenryTirri UniversityofHelsinki KatriLuostarinen CSC AilaKinnunen CSC KaijaSan ez CSC VesaSavolainen CSC VIII Organization Sponsors Mainsponsor: IBM Othersponsors:NokiaCorporation AcademyofFinland CityofEspoo WM-dataLtd. SAS Springer-Verlag TableofContents IKeynoteLectures EnablingNumericalandSoftwareTechnologiesforStudyingthe ElectricalActivityinHumanHeart . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3 XingCai,GlennTerjeLines ParallelPatient-Speci?cComputationalHaemodynamics. . . . . . . . . . . . . . . . 18 J. Cebral,R. L ohner,P. L. Choyke,P. J. Yim HighPerformanceComputing,ComputationalGrid,andNumerical Libraries. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 35 JackDongarra GridComputing:EnablingaVisionforCollaborativeResearch . . . . . . . . . . 37 GregorvonLaszewski HPC-WhatMighttheFutureHold? . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 53 JamshedMirza Multi-physicsandMulti-scaleModellingofMaterialsProcessing . . . . . . . . . 55 R. M. Nieminen Co-arrayFortranforFullandSparseMatrices. . . . . . . . . . . . . . . . . . . . . . . . . 61 JohnReid MeasuringtheLocalGeometryofValleysinComplexEnergy LandscapesbyExhaustiveExploration:TheLidMethod. . . . . . . . . . . . . . . . 62 P. Sibani,J. C. Sch on AnOverviewofanArchitechtureProposalforaHighE
Includes supplementary material: sn.pub/extras
Klappentext
CSCprovidesmodeling,computing,andinformation servicesforuniversities,researchinstitutions,andindustrialcompanies. SteeringCommittee PetterBjørstad UniversityofBergen(Norway) JackDongarra UniversityofTennesseeand OakRidgeNationalLaboratory(USA) Bj ornEngquist PDC,RoyalInstituteofTechnology(Sweden) KristjanJonasson UniversityofIceland(Iceland) BoK?agstr om Ume?aUniversityandHPC2N(Sweden) RistoNieminen HelsinkiUniversityofTechnology(Finland) KarsteinS orli SINTEF,DeptofIndustrial Mathematics(Norway) KariLaasonen UniversityofOulu(Finland) JerzyWäsniewski DanishComputingCentreforResearchand Education(UNI C)(Denmark) LocalOrganizingCommittee JariJ arvinen CSC,chairman LauriKettunen TampereUniversityofTechnology KariLaasonen UniversityofOulu RistoNieminen HelsinkiUniversityofTechnology TapaniPakkanen UniversityofJoensuu JussiRahola NokiaResearchCenter HenryTirri UniversityofHelsinki KatriLuostarinen CSC AilaKinnunen CSC KaijaSan ez CSC VesaSavolainen CSC VIII Organization Sponsors Mainsponsor: IBM Othersponsors:NokiaCorporation AcademyofFinland CityofEspoo WM-dataLtd. SAS Springer-Verlag TableofContents IKeynoteLectures EnablingNumericalandSoftwareTechnologiesforStudyingthe ElectricalActivityinHumanHeart . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3 XingCai,GlennTerjeLines ParallelPatient-Speci?cComputationalHaemodynamics. . . . . . . . . . . . . . . . 18 J. Cebral,R. L ohner,P. L. Choyke,P. J. Yim HighPerformanceComputing,ComputationalGrid,andNumerical Libraries. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 35 JackDongarra GridComputing:EnablingaVisionforCollaborativeResearch . . . . . . . . . . 37 GregorvonLaszewski HPC-WhatMighttheFutureHold? . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 53 JamshedMirza Multi-physicsandMulti-scaleModellingofMaterialsProcessing . . . . . . . . . 55 R. M. Nieminen Co-arrayFortranforFullandSparseMatrices. . . . . . . . .
Inhalt
Keynote Lectures.- Enabling Numerical and Software Technologies for Studying the Electrical Activity in Human Heart.- Parallel Patient-Specific Computational Haemodynamics.- High Performance Computing, Computational Grid, and Numerical Libraries.- Grid Computing: Enabling a Vision for Collaborative Research.- HPC What Might the Future Hold?.- Multi-physics and Multi-scale Modelling of Materials Processing.- Co-array Fortran for Full and Sparse Matrices.- Measuring the Local Geometry of Valleys in Complex Energy Landscapes by Exhaustive Exploration: The Lid Method.- An Overview of an Architecture Proposal for a High Energy Physics Grid.- Datamining and Knowledge Discovery.- A Data Mining Architecture for Clustered Environments.- Automated Fitting and Rational Modeling Algorithm for EM-Based S-Parameter Data.- A Proposal of High Performance Data Mining System.- A Quasi-Parallel Realization of the Investment Frontier in Computer Resource Allocation Using Simple Genetic Algorithm on a Single Computer.- Parallelism in Knowledge Discovery Techniques.- Parallel Program Development.- A New Approach to Parallel Debugger Architecture.- ALCOR An Algorithmic Concept Recognition Tool to Support High Level Parallel Program Development.- MPIT Communication/Computation Paradigm for Networks of SMP Workstations.- Code Optimization Techniques of Data-Intensive Tasks onto Statically Scheduled Architectures: Optimal Performance on the TigerSharc.- Practical Experiences in Parallel Computing.- PIT: A Library for the Parallelization of Irregular Problems.- Parallel Information Retrieval with Query Expansion.- Reducing Communication Cost for Parallelizing Irregular Scientific Codes.- Implementation of Parallel Collection Equi-Join Using MPI.- Practical Experiences in ParallelizingExistent Computer Programs.- Computer Science.- On the Evaluation of the Distributed Objects and Mobile Agents Programming Mod…